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Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-11 20:08:00 UTC
Update Date2021-09-26 23:15:28 UTC
HMDB IDHMDB0258515
Secondary Accession NumbersNone
Metabolite Identification
Common NameStrobilurin
DescriptionStrobilurin belongs to the class of organic compounds known as styrenes. These are organic compounds containing an ethenylbenzene moiety. Based on a literature review very few articles have been published on Strobilurin. This compound has been identified in human blood as reported by (PMID: 31557052 ). Strobilurin is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically Strobilurin is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
Thumb
Synonyms
ValueSource
6-[3',3'-Dimethyl-5'-(2-methylprop-1-en-1-yl)-3H-spiro[1,4-benzodioxine-2,2'-[1,4]dioxolane]-7-yl]-2-(methoxymethylidene)-3-methylhexa-3,5-dienoateHMDB
Chemical FormulaC25H30O7
Average Molecular Weight442.508
Monoisotopic Molecular Weight442.199153306
IUPAC Name6-[3',3'-dimethyl-5'-(2-methylprop-1-en-1-yl)-3H-spiro[1,4-benzodioxine-2,2'-[1,4]dioxolane]-7-yl]-2-(methoxymethylidene)-3-methylhexa-3,5-dienoic acid
Traditional Name6-[3',3'-dimethyl-5'-(2-methylprop-1-en-1-yl)-3H-spiro[1,4-benzodioxine-2,2'-[1,4]dioxolane]-7-yl]-2-(methoxymethylidene)-3-methylhexa-3,5-dienoic acid
CAS Registry NumberNot Available
SMILES
COC=C(C(O)=O)C(C)=CC=CC1=CC2=C(OCC3(OC(OC3(C)C)C=C(C)C)O2)C=C1
InChI Identifier
InChI=1S/C25H30O7/c1-16(2)12-22-31-24(4,5)25(32-22)15-29-20-11-10-18(13-21(20)30-25)9-7-8-17(3)19(14-28-6)23(26)27/h7-14,22H,15H2,1-6H3,(H,26,27)
InChI KeyVNWDELVQQMLKLU-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as styrenes. These are organic compounds containing an ethenylbenzene moiety.
KingdomOrganic compounds
Super ClassBenzenoids
ClassBenzene and substituted derivatives
Sub ClassStyrenes
Direct ParentStyrenes
Alternative Parents
Substituents
  • Medium-chain fatty acid
  • Styrene
  • Ketal
  • Methyl-branched fatty acid
  • Heterocyclic fatty acid
  • Branched fatty acid
  • Alkyl aryl ether
  • Fatty acyl
  • Fatty acid
  • Unsaturated fatty acid
  • Para-dioxin
  • Vinylogous ester
  • Meta-dioxolane
  • Oxacycle
  • Organoheterocyclic compound
  • Monocarboxylic acid or derivatives
  • Ether
  • Carboxylic acid
  • Carboxylic acid derivative
  • Acetal
  • Organic oxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organooxygen compound
  • Carbonyl group
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP4.2ALOGPS
logP5.16ChemAxon
logS-5.2ALOGPS
pKa (Strongest Acidic)3.96ChemAxon
pKa (Strongest Basic)-4ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count7ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area83.45 ŲChemAxon
Rotatable Bond Count6ChemAxon
Refractivity122.22 m³·mol⁻¹ChemAxon
Polarizability48.87 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+203.36330932474
DeepCCS[M-H]-200.96730932474
DeepCCS[M-2H]-233.8530932474
DeepCCS[M+Na]+209.27530932474

Predicted Retention Times

Underivatized

Chromatographic MethodRetention TimeReference
Measured using a Waters Acquity ultraperformance liquid chromatography (UPLC) ethylene-bridged hybrid (BEH) C18 column (100 mm × 2.1 mm; 1.7 μmparticle diameter). Predicted by Afia on May 17, 2022. Predicted by Afia on May 17, 2022.8.13 minutes32390414
Predicted by Siyang on May 30, 202221.1719 minutes33406817
Predicted by Siyang using ReTip algorithm on June 8, 20220.59 minutes32390414
Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid3694.9 seconds40023050
Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid504.0 seconds40023050
Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid253.6 seconds40023050
Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid240.9 seconds40023050
RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid122.5 seconds40023050
Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid811.7 seconds40023050
BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid973.4 seconds40023050
HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate)90.5 seconds40023050
UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid1846.6 seconds40023050
BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid754.2 seconds40023050
UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid1579.6 seconds40023050
SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid620.8 seconds40023050
RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid547.1 seconds40023050
MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate303.3 seconds40023050
KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA549.1 seconds40023050
Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water8.9 seconds40023050

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
StrobilurinCOC=C(C(O)=O)C(C)=CC=CC1=CC2=C(OCC3(OC(OC3(C)C)C=C(C)C)O2)C=C14975.0Standard polar33892256
StrobilurinCOC=C(C(O)=O)C(C)=CC=CC1=CC2=C(OCC3(OC(OC3(C)C)C=C(C)C)O2)C=C13095.5Standard non polar33892256
StrobilurinCOC=C(C(O)=O)C(C)=CC=CC1=CC2=C(OCC3(OC(OC3(C)C)C=C(C)C)O2)C=C13429.3Semi standard non polar33892256
Spectra
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkStrobilurin
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]