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Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-11 19:35:28 UTC
Update Date2021-09-26 23:15:02 UTC
HMDB IDHMDB0258261
Secondary Accession NumbersNone
Metabolite Identification
Common NameSetipiprant
DescriptionSetipiprant belongs to the class of organic compounds known as naphthalenecarboxamides. Naphthalenecarboxamides are compounds containing a naphthalene moiety, which bears a carboxylic acid amide group at one or more positions. Naphthalene is a bicyclic compound that is made up of two fused benzene rings. Based on a literature review a significant number of articles have been published on Setipiprant. This compound has been identified in human blood as reported by (PMID: 31557052 ). Setipiprant is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically Setipiprant is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
Thumb
Synonyms
ValueSource
KYTH-105SetipiprantChEMBL
2-(2-(1-Naphthoyl)-8-fluoro-3,4-dihydro-1H-pyrido(4,3-b)indol-5(2H)-yl)acetic acidMeSH
Chemical FormulaC24H19FN2O3
Average Molecular Weight402.425
Monoisotopic Molecular Weight402.137970643
IUPAC Name2-[8-fluoro-2-(naphthalene-1-carbonyl)-1H,2H,3H,4H,5H-pyrido[4,3-b]indol-5-yl]acetic acid
Traditional Name[8-fluoro-2-(naphthalene-1-carbonyl)-1H,3H,4H-pyrido[4,3-b]indol-5-yl]acetic acid
CAS Registry NumberNot Available
SMILES
OC(=O)CN1C2=C(CN(CC2)C(=O)C2=CC=CC3=CC=CC=C23)C2=CC(F)=CC=C12
InChI Identifier
InChI=1S/C24H19FN2O3/c25-16-8-9-21-19(12-16)20-13-26(11-10-22(20)27(21)14-23(28)29)24(30)18-7-3-5-15-4-1-2-6-17(15)18/h1-9,12H,10-11,13-14H2,(H,28,29)
InChI KeyIHAXLPDVOWLUOS-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as naphthalenecarboxamides. Naphthalenecarboxamides are compounds containing a naphthalene moiety, which bears a carboxylic acid amide group at one or more positions. Naphthalene is a bicyclic compound that is made up of two fused benzene rings.
KingdomOrganic compounds
Super ClassBenzenoids
ClassNaphthalenes
Sub ClassNaphthalenecarboxylic acids and derivatives
Direct ParentNaphthalenecarboxamides
Alternative Parents
Substituents
  • 1-naphthalenecarboxamide
  • Indolyl carboxylic acid derivative
  • Alpha-amino acid or derivatives
  • N-alkylindole
  • 3-alkylindole
  • Indole
  • Indole or derivatives
  • Aryl fluoride
  • Aryl halide
  • Substituted pyrrole
  • Heteroaromatic compound
  • Tertiary carboxylic acid amide
  • Pyrrole
  • Carboxamide group
  • Carboxylic acid derivative
  • Carboxylic acid
  • Azacycle
  • Organoheterocyclic compound
  • Monocarboxylic acid or derivatives
  • Organic oxide
  • Organic oxygen compound
  • Organic nitrogen compound
  • Hydrocarbon derivative
  • Organooxygen compound
  • Carbonyl group
  • Organonitrogen compound
  • Organohalogen compound
  • Organofluoride
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP3.84ALOGPS
logP3.66ChemAxon
logS-5.1ALOGPS
pKa (Strongest Acidic)3.93ChemAxon
pKa (Strongest Basic)-1.3ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count3ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area62.54 ŲChemAxon
Rotatable Bond Count3ChemAxon
Refractivity111.57 m³·mol⁻¹ChemAxon
Polarizability42.33 ųChemAxon
Number of Rings5ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M-2H]-220.41730932474
DeepCCS[M+Na]+195.64530932474
AllCCS[M+H]+194.432859911
AllCCS[M+H-H2O]+191.832859911
AllCCS[M+NH4]+196.832859911
AllCCS[M+Na]+197.432859911
AllCCS[M-H]-194.932859911
AllCCS[M+Na-2H]-194.332859911
AllCCS[M+HCOO]-193.732859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
SetipiprantOC(=O)CN1C2=C(CN(CC2)C(=O)C2=CC=CC3=CC=CC=C23)C2=CC(F)=CC=C124975.4Standard polar33892256
SetipiprantOC(=O)CN1C2=C(CN(CC2)C(=O)C2=CC=CC3=CC=CC=C23)C2=CC(F)=CC=C122946.1Standard non polar33892256
SetipiprantOC(=O)CN1C2=C(CN(CC2)C(=O)C2=CC=CC3=CC=CC=C23)C2=CC(F)=CC=C123848.2Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Setipiprant GC-MS (Non-derivatized) - 70eV, Positivesplash10-0a4i-1934000000-0b1663b6bbf7d4535fcb2021-09-24Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Setipiprant GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Setipiprant GC-MS (TMS_1_1) - 70eV, PositiveNot Available2021-11-05Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Setipiprant GC-MS (TBDMS_1_1) - 70eV, PositiveNot Available2021-11-05Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Setipiprant 10V, Positive-QTOFsplash10-0udi-0004900000-bc467731729677c0764c2017-07-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Setipiprant 20V, Positive-QTOFsplash10-0pi0-0159400000-b8e7899618a3d9493b612017-07-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Setipiprant 40V, Positive-QTOFsplash10-0kk9-0945000000-4c2129b80f32fbe3dec02017-07-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Setipiprant 10V, Negative-QTOFsplash10-0udi-0003900000-fa667fa9c215ceb466902017-07-26Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Setipiprant 20V, Negative-QTOFsplash10-0zfr-0229800000-fac98d2970b4129ffba92017-07-26Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Setipiprant 40V, Negative-QTOFsplash10-056r-8946000000-3caf33f0039ecc796a782017-07-26Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDDB12562
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID29738718
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkSetipiprant
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]