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Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-11 16:36:32 UTC
Update Date2021-09-26 23:11:47 UTC
HMDB IDHMDB0256261
Secondary Accession NumbersNone
Metabolite Identification
Common NamePentafluorobenzoyl acetate
DescriptionPentafluorobenzoyl acetate belongs to the class of organic compounds known as benzyloxycarbonyls. These are organic compounds containing a carbonyl group substituted with a benzyloxyl group. Based on a literature review very few articles have been published on Pentafluorobenzoyl acetate. This compound has been identified in human blood as reported by (PMID: 31557052 ). Pentafluorobenzoyl acetate is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically Pentafluorobenzoyl acetate is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
Thumb
Synonyms
ValueSource
Pentafluorobenzoyl acetic acidGenerator
Acetyl 2,3,4,5,6-pentafluorobenzoic acidHMDB
Pentafluorobenzoyl chlorideHMDB
Chemical FormulaC9H3F5O3
Average Molecular Weight254.112
Monoisotopic Molecular Weight254.000234772
IUPAC Nameacetyl 2,3,4,5,6-pentafluorobenzoate
Traditional Nameacetyl 2,3,4,5,6-pentafluorobenzoate
CAS Registry NumberNot Available
SMILES
CC(=O)OC(=O)C1=C(F)C(F)=C(F)C(F)=C1F
InChI Identifier
InChI=1S/C9H3F5O3/c1-2(15)17-9(16)3-4(10)6(12)8(14)7(13)5(3)11/h1H3
InChI KeyWODCDQXOYWLWCW-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as benzyloxycarbonyls. These are organic compounds containing a carbonyl group substituted with a benzyloxyl group.
KingdomOrganic compounds
Super ClassBenzenoids
ClassBenzene and substituted derivatives
Sub ClassBenzyloxycarbonyls
Direct ParentBenzyloxycarbonyls
Alternative Parents
Substituents
  • Halobenzoic acid or derivatives
  • 4-halobenzoic acid or derivatives
  • 3-halobenzoic acid or derivatives
  • 2-halobenzoic acid or derivatives
  • Benzyloxycarbonyl
  • Benzoic acid or derivatives
  • Benzoyl
  • Halobenzene
  • Fluorobenzene
  • Dicarboxylic acid or derivatives
  • Aryl halide
  • Aryl fluoride
  • Vinylogous halide
  • Carboxylic acid anhydride
  • Carboxylic acid derivative
  • Organic oxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organooxygen compound
  • Organofluoride
  • Organohalogen compound
  • Carbonyl group
  • Aromatic homomonocyclic compound
Molecular FrameworkAromatic homomonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP2.5ALOGPS
logP2.46ChemAxon
logS-3.4ALOGPS
pKa (Strongest Basic)-7ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count2ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area43.37 ŲChemAxon
Rotatable Bond Count3ChemAxon
Refractivity43.83 m³·mol⁻¹ChemAxon
Polarizability16.78 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+152.06230932474
DeepCCS[M-H]-149.66630932474
DeepCCS[M-2H]-182.81130932474
DeepCCS[M+Na]+158.06230932474

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Pentafluorobenzoyl acetateCC(=O)OC(=O)C1=C(F)C(F)=C(F)C(F)=C1F1391.9Standard polar33892256
Pentafluorobenzoyl acetateCC(=O)OC(=O)C1=C(F)C(F)=C(F)C(F)=C1F1040.0Standard non polar33892256
Pentafluorobenzoyl acetateCC(=O)OC(=O)C1=C(F)C(F)=C(F)C(F)=C1F1108.9Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Pentafluorobenzoyl acetate GC-MS (Non-derivatized) - 70eV, Positivesplash10-0006-3900000000-b452e79ed2a27677a8482021-09-24Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Pentafluorobenzoyl acetate GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound86755199
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]