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Record Information

Version

5.0

Status

Expected but not Quantified

Creation Date

2012-09-11 20:01:34 UTC

Update Date

2022-03-07 02:54:21 UTC

HMDB ID

HMDB0035082

Secondary Accession Numbers

HMDB35082

Metabolite Identification

Common Name

(5beta,7beta,10beta)-3,11-Eudesmadien-2-one

Description

(5beta,7beta,10beta)-3,11-Eudesmadien-2-one belongs to the class of organic compounds known as eudesmane, isoeudesmane or cycloeudesmane sesquiterpenoids. These are sesquiterpenoids with a structure based on the eudesmane skeleton. Based on a literature review a small amount of articles have been published on (5beta,7beta,10beta)-3,11-Eudesmadien-2-one.

Structure

MOL 3D MOL SDF 3D SDF PDB 3D PDB SMILES InChI

HMDB0035082
     RDKit          3D
(5beta,7beta,10beta)-3,11-Eudesmadien-2-one
 38 39  0  0  0  0  0  0  0  0999 V2000
    3.2952    1.0967   -0.9759 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9609    0.2010   -0.0813 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0327   -0.5416    0.6264 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5685   -0.0824    0.2396 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1885   -1.5176   -0.0708 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1313   -1.8859    0.4920 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1986   -0.8441    0.4016 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0195   -0.9440    1.6878 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1705   -1.3151   -0.6923 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2403   -0.3412   -0.9216 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4232   -0.7063   -1.0878 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8735    1.0719   -0.9489 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7450    1.4396   -0.4145 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4115    2.8891   -0.4650 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7653    0.5461    0.2382 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5522    0.7371   -0.5250 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3228    1.2975   -1.2002 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5280    1.6412   -1.4996 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8979   -1.6218    0.6419 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9774   -0.2042    1.7034 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0479   -0.2428    0.2542 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3717    0.0395    1.3444 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2118   -1.6026   -1.1925 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9670   -2.1885    0.3076 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4300   -2.8481   -0.0057 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0452   -2.1990    1.5657 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9302   -0.3265    1.6357 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3648   -0.5455    2.4901 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2264   -2.0060    1.9489 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5963   -1.5616   -1.6125 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5942   -2.2676   -0.3133 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5370    1.8189   -1.4128 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3061    3.4219   -0.0571 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5574    3.1686    0.1428 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2157    3.2280   -1.5240 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5607    1.0078    1.2441 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4806    0.3900   -1.5541 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8493    1.7977   -0.4095 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  3
  2  3  1  0
  2  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  7  9  1  0
  9 10  1  0
 10 11  2  0
 10 12  1  0
 12 13  2  0
 13 14  1  0
 13 15  1  0
 15 16  1  0
 16  4  1  0
 15  7  1  0
  1 17  1  0
  1 18  1  0
  3 19  1  0
  3 20  1  0
  3 21  1  0
  4 22  1  0
  5 23  1  0
  5 24  1  0
  6 25  1  0
  6 26  1  0
  8 27  1  0
  8 28  1  0
  8 29  1  0
  9 30  1  0
  9 31  1  0
 12 32  1  0
 14 33  1  0
 14 34  1  0
 14 35  1  0
 15 36  1  0
 16 37  1  0
 16 38  1  0
M  END


  Mrv0541 02241207402D          

 16 17  0  0  0  0            999 V2000
   -1.0413   -0.9612    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7625   -0.5605    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7625    0.2400    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0413    0.6407    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3201    0.2400    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4003    0.6407    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1214    0.2400    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1214   -0.5605    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4003   -0.9612    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3201   -0.5605    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3201   -1.4420    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8427    1.4420    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8427    0.6407    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4837    0.2400    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4837   -0.9612    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0413    1.4657    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  1 10  1  0  0  0  0
  2  3  1  0  0  0  0
  2 15  2  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  5 10  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  7 13  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 12 13  2  0  0  0  0
 13 14  1  0  0  0  0
  4 16  1  0  0  0  0
M  END
> <DATABASE_ID>
HMDB0035082

> <DATABASE_NAME>
hmdb

> <SMILES>
CC(=C)C1CCC2(C)CC(=O)C=C(C)C2C1

> <INCHI_IDENTIFIER>
InChI=1S/C15H22O/c1-10(2)12-5-6-15(4)9-13(16)7-11(3)14(15)8-12/h7,12,14H,1,5-6,8-9H2,2-4H3

> <INCHI_KEY>
IVZATFCVCDHOLU-UHFFFAOYSA-N

> <FORMULA>
C15H22O

> <MOLECULAR_WEIGHT>
218.3346

> <EXACT_MASS>
218.167065326

> <JCHEM_ACCEPTOR_COUNT>
1

> <JCHEM_AVERAGE_POLARIZABILITY>
26.25266685263107

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
4,8a-dimethyl-6-(prop-1-en-2-yl)-1,2,4a,5,6,7,8,8a-octahydronaphthalen-2-one

> <ALOGPS_LOGP>
4.03

> <JCHEM_LOGP>
3.699836812666668

> <ALOGPS_LOGS>
-3.95

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
2

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_BASIC>
-4.646274668378884

> <JCHEM_POLAR_SURFACE_AREA>
17.07

> <JCHEM_REFRACTIVITY>
68.07050000000001

> <JCHEM_ROTATABLE_BOND_COUNT>
1

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
2.48e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
4,8a-dimethyl-6-(prop-1-en-2-yl)-1,4a,5,6,7,8-hexahydronaphthalen-2-one

> <JCHEM_VEBER_RULE>
1

$$$$

HMDB0035082
     RDKit          3D
(5beta,7beta,10beta)-3,11-Eudesmadien-2-one
 38 39  0  0  0  0  0  0  0  0999 V2000
    3.2952    1.0967   -0.9759 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9609    0.2010   -0.0813 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0327   -0.5416    0.6264 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5685   -0.0824    0.2396 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1885   -1.5176   -0.0708 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1313   -1.8859    0.4920 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1986   -0.8441    0.4016 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0195   -0.9440    1.6878 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1705   -1.3151   -0.6923 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2403   -0.3412   -0.9216 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4232   -0.7063   -1.0878 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8735    1.0719   -0.9489 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7450    1.4396   -0.4145 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4115    2.8891   -0.4650 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7653    0.5461    0.2382 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5522    0.7371   -0.5250 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3228    1.2975   -1.2002 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5280    1.6412   -1.4996 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8979   -1.6218    0.6419 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9774   -0.2042    1.7034 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0479   -0.2428    0.2542 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3717    0.0395    1.3444 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2118   -1.6026   -1.1925 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9670   -2.1885    0.3076 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4300   -2.8481   -0.0057 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0452   -2.1990    1.5657 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9302   -0.3265    1.6357 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3648   -0.5455    2.4901 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2264   -2.0060    1.9489 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5963   -1.5616   -1.6125 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5942   -2.2676   -0.3133 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5370    1.8189   -1.4128 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3061    3.4219   -0.0571 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5574    3.1686    0.1428 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2157    3.2280   -1.5240 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5607    1.0078    1.2441 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4806    0.3900   -1.5541 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8493    1.7977   -0.4095 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  3
  2  3  1  0
  2  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  7  9  1  0
  9 10  1  0
 10 11  2  0
 10 12  1  0
 12 13  2  0
 13 14  1  0
 13 15  1  0
 15 16  1  0
 16  4  1  0
 15  7  1  0
  1 17  1  0
  1 18  1  0
  3 19  1  0
  3 20  1  0
  3 21  1  0
  4 22  1  0
  5 23  1  0
  5 24  1  0
  6 25  1  0
  6 26  1  0
  8 27  1  0
  8 28  1  0
  8 29  1  0
  9 30  1  0
  9 31  1  0
 12 32  1  0
 14 33  1  0
 14 34  1  0
 14 35  1  0
 15 36  1  0
 16 37  1  0
 16 38  1  0
M  END

HEADER    PROTEIN                                 24-FEB-12   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-FEB-12         0                                  
HETATM    1  C   UNK     0      -1.944  -1.794   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      -3.290  -1.046   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      -3.290   0.448   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      -1.944   1.196   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      -0.598   0.448   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       0.747   1.196   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       2.093   0.448   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       2.093  -1.046   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       0.747  -1.794   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      -0.598  -1.046   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      -0.598  -2.692   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       3.440   2.692   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       3.440   1.196   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       4.636   0.448   0.000  0.00  0.00           C+0
HETATM   15  O   UNK     0      -4.636  -1.794   0.000  0.00  0.00           O+0
HETATM   16  C   UNK     0      -1.944   2.736   0.000  0.00  0.00           C+0
CONECT    1    2   10                                                       
CONECT    2    1    3   15                                                  
CONECT    3    2    4                                                       
CONECT    4    3    5   16                                                  
CONECT    5    4    6   10                                                  
CONECT    6    5    7                                                       
CONECT    7    6    8   13                                                  
CONECT    8    7    9                                                       
CONECT    9    8   10                                                       
CONECT   10    1    5    9   11                                             
CONECT   11   10                                                            
CONECT   12   13                                                            
CONECT   13    7   12   14                                                  
CONECT   14   13                                                            
CONECT   15    2                                                            
CONECT   16    4                                                            
MASTER        0    0    0    0    0    0    0    0   16    0   34    0
END

COMPND    HMDB0035082
HETATM    1  C1  UNL     1       3.295   1.097  -0.976  1.00  0.00           C  
HETATM    2  C2  UNL     1       2.961   0.201  -0.081  1.00  0.00           C  
HETATM    3  C3  UNL     1       4.033  -0.542   0.626  1.00  0.00           C  
HETATM    4  C4  UNL     1       1.568  -0.082   0.240  1.00  0.00           C  
HETATM    5  C5  UNL     1       1.188  -1.518  -0.071  1.00  0.00           C  
HETATM    6  C6  UNL     1      -0.131  -1.886   0.492  1.00  0.00           C  
HETATM    7  C7  UNL     1      -1.199  -0.844   0.402  1.00  0.00           C  
HETATM    8  C8  UNL     1      -2.020  -0.944   1.688  1.00  0.00           C  
HETATM    9  C9  UNL     1      -2.171  -1.315  -0.692  1.00  0.00           C  
HETATM   10  C10 UNL     1      -3.240  -0.341  -0.922  1.00  0.00           C  
HETATM   11  O1  UNL     1      -4.423  -0.706  -1.088  1.00  0.00           O  
HETATM   12  C11 UNL     1      -2.873   1.072  -0.949  1.00  0.00           C  
HETATM   13  C12 UNL     1      -1.745   1.440  -0.414  1.00  0.00           C  
HETATM   14  C13 UNL     1      -1.412   2.889  -0.465  1.00  0.00           C  
HETATM   15  C14 UNL     1      -0.765   0.546   0.238  1.00  0.00           C  
HETATM   16  C15 UNL     1       0.552   0.737  -0.525  1.00  0.00           C  
HETATM   17  H1  UNL     1       4.323   1.298  -1.200  1.00  0.00           H  
HETATM   18  H2  UNL     1       2.528   1.641  -1.500  1.00  0.00           H  
HETATM   19  H3  UNL     1       3.898  -1.622   0.642  1.00  0.00           H  
HETATM   20  H4  UNL     1       3.977  -0.204   1.703  1.00  0.00           H  
HETATM   21  H5  UNL     1       5.048  -0.243   0.254  1.00  0.00           H  
HETATM   22  H6  UNL     1       1.372   0.040   1.344  1.00  0.00           H  
HETATM   23  H7  UNL     1       1.212  -1.603  -1.193  1.00  0.00           H  
HETATM   24  H8  UNL     1       1.967  -2.189   0.308  1.00  0.00           H  
HETATM   25  H9  UNL     1      -0.430  -2.848  -0.006  1.00  0.00           H  
HETATM   26  H10 UNL     1       0.045  -2.199   1.566  1.00  0.00           H  
HETATM   27  H11 UNL     1      -2.930  -0.327   1.636  1.00  0.00           H  
HETATM   28  H12 UNL     1      -1.365  -0.545   2.490  1.00  0.00           H  
HETATM   29  H13 UNL     1      -2.226  -2.006   1.949  1.00  0.00           H  
HETATM   30  H14 UNL     1      -1.596  -1.562  -1.612  1.00  0.00           H  
HETATM   31  H15 UNL     1      -2.594  -2.268  -0.313  1.00  0.00           H  
HETATM   32  H16 UNL     1      -3.537   1.819  -1.413  1.00  0.00           H  
HETATM   33  H17 UNL     1      -2.306   3.422  -0.057  1.00  0.00           H  
HETATM   34  H18 UNL     1      -0.557   3.169   0.143  1.00  0.00           H  
HETATM   35  H19 UNL     1      -1.216   3.228  -1.524  1.00  0.00           H  
HETATM   36  H20 UNL     1      -0.561   1.008   1.244  1.00  0.00           H  
HETATM   37  H21 UNL     1       0.481   0.390  -1.554  1.00  0.00           H  
HETATM   38  H22 UNL     1       0.849   1.798  -0.410  1.00  0.00           H  
CONECT    1    2    2   17   18
CONECT    2    3    4
CONECT    3   19   20   21
CONECT    4    5   16   22
CONECT    5    6   23   24
CONECT    6    7   25   26
CONECT    7    8    9   15
CONECT    8   27   28   29
CONECT    9   10   30   31
CONECT   10   11   11   12
CONECT   12   13   13   32
CONECT   13   14   15
CONECT   14   33   34   35
CONECT   15   16   36
CONECT   16   37   38
END

HMDB0035082
     RDKit          3D
(5beta,7beta,10beta)-3,11-Eudesmadien-2-one
 38 39  0  0  0  0  0  0  0  0999 V2000
    3.2952    1.0967   -0.9759 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9609    0.2010   -0.0813 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0327   -0.5416    0.6264 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5685   -0.0824    0.2396 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1885   -1.5176   -0.0708 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1313   -1.8859    0.4920 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1986   -0.8441    0.4016 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0195   -0.9440    1.6878 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1705   -1.3151   -0.6923 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2403   -0.3412   -0.9216 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4232   -0.7063   -1.0878 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8735    1.0719   -0.9489 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7450    1.4396   -0.4145 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4115    2.8891   -0.4650 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7653    0.5461    0.2382 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5522    0.7371   -0.5250 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3228    1.2975   -1.2002 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5280    1.6412   -1.4996 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8979   -1.6218    0.6419 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9774   -0.2042    1.7034 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0479   -0.2428    0.2542 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3717    0.0395    1.3444 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2118   -1.6026   -1.1925 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9670   -2.1885    0.3076 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4300   -2.8481   -0.0057 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0452   -2.1990    1.5657 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9302   -0.3265    1.6357 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3648   -0.5455    2.4901 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2264   -2.0060    1.9489 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5963   -1.5616   -1.6125 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5942   -2.2676   -0.3133 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5370    1.8189   -1.4128 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3061    3.4219   -0.0571 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5574    3.1686    0.1428 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2157    3.2280   -1.5240 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5607    1.0078    1.2441 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4806    0.3900   -1.5541 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8493    1.7977   -0.4095 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  3
  2  3  1  0
  2  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  7  9  1  0
  9 10  1  0
 10 11  2  0
 10 12  1  0
 12 13  2  0
 13 14  1  0
 13 15  1  0
 15 16  1  0
 16  4  1  0
 15  7  1  0
  1 17  1  0
  1 18  1  0
  3 19  1  0
  3 20  1  0
  3 21  1  0
  4 22  1  0
  5 23  1  0
  5 24  1  0
  6 25  1  0
  6 26  1  0
  8 27  1  0
  8 28  1  0
  8 29  1  0
  9 30  1  0
  9 31  1  0
 12 32  1  0
 14 33  1  0
 14 34  1  0
 14 35  1  0
 15 36  1  0
 16 37  1  0
 16 38  1  0
M  END

View in JSmol View Stereo Labels

Synonyms

Value	Source
(5b,7b,10b)-3,11-Eudesmadien-2-one	Generator
(5Β,7β,10β)-3,11-eudesmadien-2-one	Generator
[4AS-(4aalpha,6alpha,8aalpha)]-4a,5,6,7,8,8a-hexahydro-4,8a-dimethyl-6-(1-methylethenyl)-2(1H)-naphthalenone	HMDB

Chemical Formula

C₁₅H₂₂O

Average Molecular Weight

218.3346

Monoisotopic Molecular Weight

218.167065326

IUPAC Name

4,8a-dimethyl-6-(prop-1-en-2-yl)-1,2,4a,5,6,7,8,8a-octahydronaphthalen-2-one

Traditional Name

4,8a-dimethyl-6-(prop-1-en-2-yl)-1,4a,5,6,7,8-hexahydronaphthalen-2-one

CAS Registry Number

86917-80-8

SMILES

CC(=C)C1CCC2(C)CC(=O)C=C(C)C2C1

InChI Identifier

InChI=1S/C15H22O/c1-10(2)12-5-6-15(4)9-13(16)7-11(3)14(15)8-12/h7,12,14H,1,5-6,8-9H2,2-4H3

InChI Key

IVZATFCVCDHOLU-UHFFFAOYSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as eudesmane, isoeudesmane or cycloeudesmane sesquiterpenoids. These are sesquiterpenoids with a structure based on the eudesmane skeleton.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Sesquiterpenoids

Direct Parent

Eudesmane, isoeudesmane or cycloeudesmane sesquiterpenoids

Alternative Parents

Substituents

Eudesmane, isoeudesmane or cycloeudesmane sesquiterpenoid
Cyclohexenone
Cyclic ketone
Ketone
Organic oxygen compound
Organic oxide
Hydrocarbon derivative
Organooxygen compound
Carbonyl group
Aliphatic homopolycyclic compound

Molecular Framework

Aliphatic homopolycyclic compounds

External Descriptors

Not Available

Ontology

Physiological effect

Not Available

Disposition

Biological location

Cellular substructure

Route of exposure

Enteral

Ingestion (HMDB: HMDB0035082)

Source

Exogenous

Food

Food (HMDB: HMDB0035082)

Fruit

Citrus

Citrus (FooDB: FOOD00859)

Exogenous (HMDB: HMDB0035082)

Endogenous

Plant

Plant (HMDB: HMDB0035082)

Animal

Animal (HMDB: HMDB0035082)

Endogenous (HMDB: HMDB0035082)

Process

Naturally occurring process

Biological process

Chemical reaction

Lipid Peroxidation (HMDB: HMDB0035082)

Biochemical pathway

Metabolic pathway

Fatty Acid Metabolism (HMDB: HMDB0035082)

Lipid metabolism pathway (HMDB: HMDB0035082)

Cellular process

Cell signaling (HMDB: HMDB0035082)

Biochemical process

Lipid transport (HMDB: HMDB0035082)

Role

Biological role

Energy source (HMDB: HMDB0035082)

Industrial application

Manufacturing industry

Material processing agent

Fluid processing agent

Surfactant

Surfactant (HMDB: HMDB0035082)

Physical Properties

State

Solid

Experimental Molecular Properties

Property	Value	Reference
Melting Point	38 °C	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Experimental Chromatographic Properties

Not Available

Predicted Molecular Properties

Property	Value	Source
Water Solubility	0.025 g/L	ALOGPS
logP	4.03	ALOGPS
logP	3.7	ChemAxon
logS	-4	ALOGPS
pKa (Strongest Basic)	-4.6	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	1	ChemAxon
Hydrogen Donor Count	0	ChemAxon
Polar Surface Area	17.07 Å²	ChemAxon
Rotatable Bond Count	1	ChemAxon
Refractivity	68.07 m³·mol⁻¹	ChemAxon
Polarizability	26.25 Å³	ChemAxon
Number of Rings	2	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	Yes	ChemAxon
MDDR-like Rule	No	ChemAxon

Predicted Chromatographic Properties

Predicted Collision Cross Sections

Predictor	Adduct Type	CCS Value (Å²)	Reference
DarkChem	[M+H]+	153.8	31661259
DarkChem	[M-H]-	149.596	31661259
DeepCCS	[M+H]+	155.521	30932474
DeepCCS	[M-H]-	153.163	30932474
DeepCCS	[M-2H]-	186.557	30932474
DeepCCS	[M+Na]+	161.614	30932474
AllCCS	[M+H]+	151.6	32859911
AllCCS	[M+H-H2O]+	147.7	32859911
AllCCS	[M+NH4]+	155.2	32859911
AllCCS	[M+Na]+	156.2	32859911
AllCCS	[M-H]-	159.5	32859911
AllCCS	[M+Na-2H]-	159.9	32859911
AllCCS	[M+HCOO]-	160.5	32859911

Predicted Retention Times

Underivatized

Chromatographic Method	Retention Time	Reference
Measured using a Waters Acquity ultraperformance liquid chromatography (UPLC) ethylene-bridged hybrid (BEH) C18 column (100 mm × 2.1 mm; 1.7 μmparticle diameter). Predicted by Afia on May 17, 2022.	7.96 minutes	32390414
Predicted by Siyang on May 30, 2022	16.194 minutes	33406817
Predicted by Siyang using ReTip algorithm on June 8, 2022	1.16 minutes	32390414
Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid	2300.5 seconds	40023050
Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid	515.5 seconds	40023050
Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid	202.5 seconds	40023050
Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid	248.0 seconds	40023050
RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid	236.6 seconds	40023050
Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid	577.4 seconds	40023050
BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid	747.1 seconds	40023050
HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate)	75.9 seconds	40023050
UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid	1287.8 seconds	40023050
BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid	439.1 seconds	40023050
UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid	1346.6 seconds	40023050
SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid	414.8 seconds	40023050
RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid	393.5 seconds	40023050
MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate	370.3 seconds	40023050
KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA	481.3 seconds	40023050
Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water	9.6 seconds	40023050

Predicted Kovats Retention Indices

Underivatized

Metabolite	SMILES	Kovats RI Value	Column Type	Reference
(5beta,7beta,10beta)-3,11-Eudesmadien-2-one	CC(=C)C1CCC2(C)CC(=O)C=C(C)C2C1	2509.8	Standard polar	33892256
(5beta,7beta,10beta)-3,11-Eudesmadien-2-one	CC(=C)C1CCC2(C)CC(=O)C=C(C)C2C1	1706.6	Standard non polar	33892256
(5beta,7beta,10beta)-3,11-Eudesmadien-2-one	CC(=C)C1CCC2(C)CC(=O)C=C(C)C2C1	1787.1	Semi standard non polar	33892256

Derivatized

Derivative Name / Structure	SMILES	Kovats RI Value	Column Type	Reference
(5beta,7beta,10beta)-3,11-Eudesmadien-2-one,1TMS,isomer #1	C=C(C)C1CCC2(C)C=C(O[Si](C)(C)C)C=C(C)C2C1	1833.7	Semi standard non polar	33892256
(5beta,7beta,10beta)-3,11-Eudesmadien-2-one,1TMS,isomer #1	C=C(C)C1CCC2(C)C=C(O[Si](C)(C)C)C=C(C)C2C1	1746.0	Standard non polar	33892256
(5beta,7beta,10beta)-3,11-Eudesmadien-2-one,1TBDMS,isomer #1	C=C(C)C1CCC2(C)C=C(O[Si](C)(C)C(C)(C)C)C=C(C)C2C1	2080.2	Semi standard non polar	33892256
(5beta,7beta,10beta)-3,11-Eudesmadien-2-one,1TBDMS,isomer #1	C=C(C)C1CCC2(C)C=C(O[Si](C)(C)C(C)(C)C)C=C(C)C2C1	1974.2	Standard non polar	33892256

Spectra

GC-MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted GC-MS	Predicted GC-MS Spectrum - (5beta,7beta,10beta)-3,11-Eudesmadien-2-one GC-MS (Non-derivatized) - 70eV, Positive	splash10-0ugr-3920000000-d9d1719c35de58a33590	2017-09-01	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - (5beta,7beta,10beta)-3,11-Eudesmadien-2-one GC-MS (Non-derivatized) - 70eV, Positive	Not Available	2021-10-12	Wishart Lab	View Spectrum

MS/MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - (5beta,7beta,10beta)-3,11-Eudesmadien-2-one 10V, Positive-QTOF	splash10-014i-0290000000-90016ec1d04788543762	2016-06-03	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - (5beta,7beta,10beta)-3,11-Eudesmadien-2-one 20V, Positive-QTOF	splash10-0gdi-3940000000-c17ad5459cbad82558a7	2016-06-03	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - (5beta,7beta,10beta)-3,11-Eudesmadien-2-one 40V, Positive-QTOF	splash10-0uyi-9500000000-7f357fee5142140129fb	2016-06-03	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - (5beta,7beta,10beta)-3,11-Eudesmadien-2-one 10V, Negative-QTOF	splash10-014i-0090000000-678e925b53b29c7e26d8	2016-08-03	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - (5beta,7beta,10beta)-3,11-Eudesmadien-2-one 20V, Negative-QTOF	splash10-014i-0190000000-64293f8cd487c3536b84	2016-08-03	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - (5beta,7beta,10beta)-3,11-Eudesmadien-2-one 40V, Negative-QTOF	splash10-0udl-4950000000-f17ef21ce795d549ecda	2016-08-03	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - (5beta,7beta,10beta)-3,11-Eudesmadien-2-one 10V, Negative-QTOF	splash10-014i-0090000000-868e2fb00a2cfbf6c529	2021-09-23	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - (5beta,7beta,10beta)-3,11-Eudesmadien-2-one 20V, Negative-QTOF	splash10-014i-0090000000-868e2fb00a2cfbf6c529	2021-09-23	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - (5beta,7beta,10beta)-3,11-Eudesmadien-2-one 40V, Negative-QTOF	splash10-014j-0960000000-5c911d31407a4d9e7345	2021-09-23	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - (5beta,7beta,10beta)-3,11-Eudesmadien-2-one 10V, Positive-QTOF	splash10-014i-0890000000-a0a6eb8e9184cc01287a	2021-09-25	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - (5beta,7beta,10beta)-3,11-Eudesmadien-2-one 20V, Positive-QTOF	splash10-00p3-4920000000-b23aafcd4c0a7fb548d0	2021-09-25	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - (5beta,7beta,10beta)-3,11-Eudesmadien-2-one 40V, Positive-QTOF	splash10-016u-9400000000-3ba1d944cc563014bc7f	2021-09-25	Wishart Lab	View Spectrum

Biological Properties

Cellular Locations

Extracellular
Membrane

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Pathways

Not Available

Name	SMPDB/PathBank	KEGG

Normal Concentrations

Not Available

Abnormal Concentrations

Not Available

Associated Disorders and Diseases

Disease References

None

Associated OMIM IDs

None

External Links

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

FDB013707

KNApSAcK ID

C00012757

Chemspider ID

491704

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

565648

PDB ID

Not Available

ChEBI ID

Not Available

Food Biomarker Ontology

Not Available

VMH ID

Not Available

MarkerDB ID

Not Available

Good Scents ID

Not Available

References

Synthesis Reference

Not Available

Material Safety Data Sheet (MSDS)

Not Available

General References

Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
(). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.

Showing metabocard for (5beta,7beta,10beta)-3,11-Eudesmadien-2-one (HMDB0035082)

MOL for HMDB0035082 ((5beta,7beta,10beta)-3,11-Eudesmadien-2-one)

3D MOL for HMDB0035082 ((5beta,7beta,10beta)-3,11-Eudesmadien-2-one)

3D SDF for HMDB0035082 ((5beta,7beta,10beta)-3,11-Eudesmadien-2-one)

3D-SDF for HMDB0035082 ((5beta,7beta,10beta)-3,11-Eudesmadien-2-one)

PDB for HMDB0035082 ((5beta,7beta,10beta)-3,11-Eudesmadien-2-one)

3D PDB for HMDB0035082 ((5beta,7beta,10beta)-3,11-Eudesmadien-2-one)

SMILES for HMDB0035082 ((5beta,7beta,10beta)-3,11-Eudesmadien-2-one)

INCHI for HMDB0035082 ((5beta,7beta,10beta)-3,11-Eudesmadien-2-one)

Structure for HMDB0035082 ((5beta,7beta,10beta)-3,11-Eudesmadien-2-one)

3D Structure for HMDB0035082 ((5beta,7beta,10beta)-3,11-Eudesmadien-2-one)

Predicted Collision Cross Sections

Predicted Retention Times

Underivatized

Predicted Kovats Retention Indices

Underivatized

Derivatized

GC-MS Spectra

MS/MS Spectra