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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 18:41:33 UTC
Update Date2022-03-07 02:53:54 UTC
HMDB IDHMDB0033918
Secondary Accession Numbers
  • HMDB33918
Metabolite Identification
Common Name(15alpha,20R)-15,20-Dihydroxypregn-4-en-3-one
Description(15alpha,20R)-15,20-Dihydroxypregn-4-en-3-one belongs to the class of organic compounds known as gluco/mineralocorticoids, progestogins and derivatives. These are steroids with a structure based on a hydroxylated prostane moiety. Based on a literature review a significant number of articles have been published on (15alpha,20R)-15,20-Dihydroxypregn-4-en-3-one.
Structure
Data?1563862481
Synonyms
ValueSource
(15a,20R)-15,20-Dihydroxypregn-4-en-3-oneGenerator
(15Α,20R)-15,20-dihydroxypregn-4-en-3-oneGenerator
Chemical FormulaC21H32O3
Average Molecular Weight332.477
Monoisotopic Molecular Weight332.23514489
IUPAC Name12-hydroxy-14-(1-hydroxyethyl)-2,15-dimethyltetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadec-6-en-5-one
Traditional Name12-hydroxy-14-(1-hydroxyethyl)-2,15-dimethyltetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadec-6-en-5-one
CAS Registry NumberNot Available
SMILES
CC(O)C1CC(O)C2C3CCC4=CC(=O)CCC4(C)C3CCC12C
InChI Identifier
InChI=1S/C21H32O3/c1-12(22)17-11-18(24)19-15-5-4-13-10-14(23)6-8-20(13,2)16(15)7-9-21(17,19)3/h10,12,15-19,22,24H,4-9,11H2,1-3H3
InChI KeyOVQSVMZESAVYPN-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as gluco/mineralocorticoids, progestogins and derivatives. These are steroids with a structure based on a hydroxylated prostane moiety.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassSteroids and steroid derivatives
Sub ClassPregnane steroids
Direct ParentGluco/mineralocorticoids, progestogins and derivatives
Alternative Parents
Substituents
  • Progestogin-skeleton
  • 20-hydroxysteroid
  • 3-oxo-delta-4-steroid
  • 3-oxosteroid
  • Oxosteroid
  • 15-hydroxysteroid
  • Hydroxysteroid
  • Delta-4-steroid
  • Cyclohexenone
  • Cyclic alcohol
  • Secondary alcohol
  • Cyclic ketone
  • Ketone
  • Organooxygen compound
  • Hydrocarbon derivative
  • Organic oxygen compound
  • Carbonyl group
  • Alcohol
  • Organic oxide
  • Aliphatic homopolycyclic compound
Molecular FrameworkAliphatic homopolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
Process
Role
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point132 - 134 °CNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.058 g/LALOGPS
logP2.34ALOGPS
logP2.63ChemAxon
logS-3.8ALOGPS
pKa (Strongest Acidic)14.75ChemAxon
pKa (Strongest Basic)-2.7ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count3ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area57.53 ŲChemAxon
Rotatable Bond Count1ChemAxon
Refractivity95.33 m³·mol⁻¹ChemAxon
Polarizability38.5 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+177.81231661259
DarkChem[M-H]-171.26831661259
DeepCCS[M-2H]-208.6830932474
DeepCCS[M+Na]+183.90830932474
AllCCS[M+H]+185.532859911
AllCCS[M+H-H2O]+182.732859911
AllCCS[M+NH4]+188.132859911
AllCCS[M+Na]+188.932859911
AllCCS[M-H]-188.832859911
AllCCS[M+Na-2H]-189.332859911
AllCCS[M+HCOO]-189.932859911

Predicted Retention Times

Underivatized

Chromatographic MethodRetention TimeReference
Measured using a Waters Acquity ultraperformance liquid chromatography (UPLC) ethylene-bridged hybrid (BEH) C18 column (100 mm × 2.1 mm; 1.7 μmparticle diameter). Predicted by Afia on May 17, 2022. 6.33 minutes32390414
Predicted by Siyang on May 30, 202213.2958 minutes33406817
Predicted by Siyang using ReTip algorithm on June 8, 20221.07 minutes32390414
Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid2571.0 seconds40023050
Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid234.0 seconds40023050
Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid190.7 seconds40023050
Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid172.2 seconds40023050
RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid288.4 seconds40023050
Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid546.2 seconds40023050
BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid603.5 seconds40023050
HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate)102.1 seconds40023050
UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid1041.7 seconds40023050
BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid464.7 seconds40023050
UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid1413.3 seconds40023050
SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid341.6 seconds40023050
RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid417.6 seconds40023050
MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate277.2 seconds40023050
KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA363.3 seconds40023050
Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water16.9 seconds40023050

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
(15alpha,20R)-15,20-Dihydroxypregn-4-en-3-oneCC(O)C1CC(O)C2C3CCC4=CC(=O)CCC4(C)C3CCC12C3866.6Standard polar33892256
(15alpha,20R)-15,20-Dihydroxypregn-4-en-3-oneCC(O)C1CC(O)C2C3CCC4=CC(=O)CCC4(C)C3CCC12C2788.5Standard non polar33892256
(15alpha,20R)-15,20-Dihydroxypregn-4-en-3-oneCC(O)C1CC(O)C2C3CCC4=CC(=O)CCC4(C)C3CCC12C3092.0Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
(15alpha,20R)-15,20-Dihydroxypregn-4-en-3-one,1TMS,isomer #1CC(O[Si](C)(C)C)C1CC(O)C2C3CCC4=CC(=O)CCC4(C)C3CCC12C3095.9Semi standard non polar33892256
(15alpha,20R)-15,20-Dihydroxypregn-4-en-3-one,1TMS,isomer #2CC(O)C1CC(O[Si](C)(C)C)C2C3CCC4=CC(=O)CCC4(C)C3CCC12C3107.5Semi standard non polar33892256
(15alpha,20R)-15,20-Dihydroxypregn-4-en-3-one,1TMS,isomer #3CC(O)C1CC(O)C2C3CCC4=CC(O[Si](C)(C)C)=CCC4(C)C3CCC12C3010.7Semi standard non polar33892256
(15alpha,20R)-15,20-Dihydroxypregn-4-en-3-one,2TMS,isomer #1CC(O[Si](C)(C)C)C1CC(O[Si](C)(C)C)C2C3CCC4=CC(=O)CCC4(C)C3CCC12C3121.3Semi standard non polar33892256
(15alpha,20R)-15,20-Dihydroxypregn-4-en-3-one,2TMS,isomer #2CC(O[Si](C)(C)C)C1CC(O)C2C3CCC4=CC(O[Si](C)(C)C)=CCC4(C)C3CCC12C3040.8Semi standard non polar33892256
(15alpha,20R)-15,20-Dihydroxypregn-4-en-3-one,2TMS,isomer #3CC(O)C1CC(O[Si](C)(C)C)C2C3CCC4=CC(O[Si](C)(C)C)=CCC4(C)C3CCC12C3038.3Semi standard non polar33892256
(15alpha,20R)-15,20-Dihydroxypregn-4-en-3-one,3TMS,isomer #1CC(O[Si](C)(C)C)C1CC(O[Si](C)(C)C)C2C3CCC4=CC(O[Si](C)(C)C)=CCC4(C)C3CCC12C2958.8Semi standard non polar33892256
(15alpha,20R)-15,20-Dihydroxypregn-4-en-3-one,3TMS,isomer #1CC(O[Si](C)(C)C)C1CC(O[Si](C)(C)C)C2C3CCC4=CC(O[Si](C)(C)C)=CCC4(C)C3CCC12C3044.7Standard non polar33892256
(15alpha,20R)-15,20-Dihydroxypregn-4-en-3-one,1TBDMS,isomer #1CC(O[Si](C)(C)C(C)(C)C)C1CC(O)C2C3CCC4=CC(=O)CCC4(C)C3CCC12C3345.6Semi standard non polar33892256
(15alpha,20R)-15,20-Dihydroxypregn-4-en-3-one,1TBDMS,isomer #2CC(O)C1CC(O[Si](C)(C)C(C)(C)C)C2C3CCC4=CC(=O)CCC4(C)C3CCC12C3351.1Semi standard non polar33892256
(15alpha,20R)-15,20-Dihydroxypregn-4-en-3-one,1TBDMS,isomer #3CC(O)C1CC(O)C2C3CCC4=CC(O[Si](C)(C)C(C)(C)C)=CCC4(C)C3CCC12C3250.5Semi standard non polar33892256
(15alpha,20R)-15,20-Dihydroxypregn-4-en-3-one,2TBDMS,isomer #1CC(O[Si](C)(C)C(C)(C)C)C1CC(O[Si](C)(C)C(C)(C)C)C2C3CCC4=CC(=O)CCC4(C)C3CCC12C3591.6Semi standard non polar33892256
(15alpha,20R)-15,20-Dihydroxypregn-4-en-3-one,2TBDMS,isomer #2CC(O[Si](C)(C)C(C)(C)C)C1CC(O)C2C3CCC4=CC(O[Si](C)(C)C(C)(C)C)=CCC4(C)C3CCC12C3512.8Semi standard non polar33892256
(15alpha,20R)-15,20-Dihydroxypregn-4-en-3-one,2TBDMS,isomer #3CC(O)C1CC(O[Si](C)(C)C(C)(C)C)C2C3CCC4=CC(O[Si](C)(C)C(C)(C)C)=CCC4(C)C3CCC12C3494.3Semi standard non polar33892256
(15alpha,20R)-15,20-Dihydroxypregn-4-en-3-one,3TBDMS,isomer #1CC(O[Si](C)(C)C(C)(C)C)C1CC(O[Si](C)(C)C(C)(C)C)C2C3CCC4=CC(O[Si](C)(C)C(C)(C)C)=CCC4(C)C3CCC12C3640.1Semi standard non polar33892256
(15alpha,20R)-15,20-Dihydroxypregn-4-en-3-one,3TBDMS,isomer #1CC(O[Si](C)(C)C(C)(C)C)C1CC(O[Si](C)(C)C(C)(C)C)C2C3CCC4=CC(O[Si](C)(C)C(C)(C)C)=CCC4(C)C3CCC12C3772.3Standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - (15alpha,20R)-15,20-Dihydroxypregn-4-en-3-one GC-MS (Non-derivatized) - 70eV, Positivesplash10-029i-1294000000-d185512dbebaeae952b92017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - (15alpha,20R)-15,20-Dihydroxypregn-4-en-3-one GC-MS (2 TMS) - 70eV, Positivesplash10-03di-2313900000-042cfa6697a1fafeb4112017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - (15alpha,20R)-15,20-Dihydroxypregn-4-en-3-one GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (15alpha,20R)-15,20-Dihydroxypregn-4-en-3-one 10V, Positive-QTOFsplash10-0159-0049000000-0000572e3f131251db722015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (15alpha,20R)-15,20-Dihydroxypregn-4-en-3-one 20V, Positive-QTOFsplash10-014j-0395000000-7da40c110392df0b64a72015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (15alpha,20R)-15,20-Dihydroxypregn-4-en-3-one 40V, Positive-QTOFsplash10-052e-0590000000-59e4a8cb610ccc6a32e32015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (15alpha,20R)-15,20-Dihydroxypregn-4-en-3-one 10V, Negative-QTOFsplash10-001i-0019000000-6d2b33cd4b067c542e7b2015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (15alpha,20R)-15,20-Dihydroxypregn-4-en-3-one 20V, Negative-QTOFsplash10-01q9-0039000000-b643883f66448c0437df2015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (15alpha,20R)-15,20-Dihydroxypregn-4-en-3-one 40V, Negative-QTOFsplash10-00ku-1093000000-b5f5bf155b27d5da47082015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (15alpha,20R)-15,20-Dihydroxypregn-4-en-3-one 10V, Negative-QTOFsplash10-001i-0019000000-3d48d03153e0762a8c962021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (15alpha,20R)-15,20-Dihydroxypregn-4-en-3-one 20V, Negative-QTOFsplash10-01q9-0039000000-1cd6b61e4a1bd813ceeb2021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (15alpha,20R)-15,20-Dihydroxypregn-4-en-3-one 40V, Negative-QTOFsplash10-00kr-0092000000-bd0dac4511ff5245c7dd2021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (15alpha,20R)-15,20-Dihydroxypregn-4-en-3-one 10V, Positive-QTOFsplash10-00lr-0019000000-daab8fa283d37b415de22021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (15alpha,20R)-15,20-Dihydroxypregn-4-en-3-one 20V, Positive-QTOFsplash10-00ls-0294000000-731ffa1f37611a7ffb072021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (15alpha,20R)-15,20-Dihydroxypregn-4-en-3-one 40V, Positive-QTOFsplash10-052f-3940000000-4ade5231e4baac5e0ac72021-09-25Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Cytoplasm
  • Extracellular
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB012116
KNApSAcK IDNot Available
Chemspider ID9920329
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound77963611
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
  2. Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
  3. Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
  4. Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
  5. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
  6. Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.